The detailed information of tRNA gene sequence


Sequence ID>WENV170974700
Genome IDMTKY01071937
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1482
End posion on genome 1567
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccccaagccc
tRNA gene sequence 
GGAGGGATGGCAGAGCGGTCGATTGCGGCGGTCTTGAAAACCGTTGATCTCACGATCCGG
GGGTTCGAATCCCTCTCCCTCCGCCT
Downstream region at tRNA end position 
taaaactgca
Secondary structure (Cloverleaf model)
>WENV170974700	Ser	TGA
                   c      GCCT taaaactgca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGATCTCACGATCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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