The detailed information of tRNA gene sequence


Sequence ID>WENV170974701
Genome IDMTKY01071937
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1590
End posion on genome 1682
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tacgatcgct
tRNA gene sequence 
GGGGAGGTGCCGGAGTGGACGATCGGGGCCGCCTGCTAAGTGGTTGTAGGGCCTTAATCC
CTACCCAGGGTTCGAATCCCTGCCTCCCCGCCT
Downstream region at tRNA end position 
tggtcttttg
Secondary structure (Cloverleaf model)
>WENV170974701	Ser	GCT
                   t      GCCT tggtcttttg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G       + | | |                 T T
    A       T C G G
      C G A        G     TGTAGGGCCTTAATCCCTACC
                    G + T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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