The detailed information of tRNA gene sequence


Sequence ID>WENV170974708
Genome IDMTKY01071956
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 10872
End posion on genome 10797
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagaacctga
tRNA gene sequence 
CGCGAGGTGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCGAGT
CCTTCCCTCGCTACCA
Downstream region at tRNA end position 
tttttttatc
Secondary structure (Cloverleaf model)
>WENV170974708	Met	CAT
                   a      ACCA tttttttatc
                     C   T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     C T T C C     A
      T G A        G      | | | | |     G
    T       C G A G       G A A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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