The detailed information of tRNA gene sequence


Sequence ID>WENV170974735
Genome IDMTKY01072608
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4627
End posion on genome 4552
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttttccggcg
tRNA gene sequence 
GCCCCCATCGTCTAGCGGCCTAGGATATCAGGTTCTCATCCTGAAGACAGGGGTTCGAGT
CCCCTTGGGGGTATCA
Downstream region at tRNA end position 
gcccaatcag
Secondary structure (Cloverleaf model)
>WENV170974735	Glu	CTC
                   g      ATCA gcccaatcag
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | +                 T T
    C       G G A T
      C T A        A     AGAC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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