The detailed information of tRNA gene sequence


Sequence ID>WENV170974784
Genome IDMTKY01074221
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1754
End posion on genome 1851
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
acgtctcggc
tRNA gene sequence 
GGAGCGGCTCCCGGTCCGGTGACCGGCGCGGTCTTCAAAACCGTCTGCGGGGCGGTGCTC
CCGTCCTGGGTGGGTTCGACTCCCATGTCGCTCCGCCA
Downstream region at tRNA end position 
agtccccggc
Secondary structure (Cloverleaf model)
>WENV170974784	SeC(p)	TCA
                   c      GCCA agtccccggc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G          T C
                    T     T A C C C     A
      C C T        C      + | | | |     G
    G       G G C C       G T G G G     C
    G       | | | |                 T T
    T       C C G G
      G A          C     CTGCGGGGCGGTGCTCCCGTCCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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