The detailed information of tRNA gene sequence


Sequence ID>WENV170974787
Genome IDMTKY01074341
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 913
End posion on genome 838
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cggtgttcat
tRNA gene sequence 
CGGGGAGTAGCGCAGCCCGGTTAGCGCGCCTCGTTCGGGACGAGGAGGTCGGAGGTTCGA
ATCCTCTCTCCCCGACtt
Downstream region at tRNA end position 
ggatcggtcg
Secondary structure (Cloverleaf model)
>WENV170974787	Pro	CGG
                   t      ACtt ggatcggtcg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     G
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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