The detailed information of tRNA gene sequence


Sequence ID>WENV170974801
Genome IDMTKY01075075
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 236
End posion on genome 310
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcagcctccc
tRNA gene sequence 
GGGGCGTTAGCTCAGTCGGTCAGAGCAGCGGACTCATAATCCGTCGGTCGTCGGTTCAAG
CCCGACACGCCCCACtc
Downstream region at tRNA end position 
agcggcggtc
Secondary structure (Cloverleaf model)
>WENV170974801	Met	CAT
                   c      ACtc agcggcggtc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          C G
                    T     C A G C C     A
      T G A        A      | | | | |     A
    C       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     CGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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