The detailed information of tRNA gene sequence


Sequence ID>WENV170974822
Genome IDMTKY01076277
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1484
End posion on genome 1402
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tctcacgcgc
tRNA gene sequence 
GGAGGGTTAGCGTAATGGTAACGCACCGGTCTTGAAAACCGGCGCCTTCGGGCTTGGGGG
TTCGAGTCCCTCACCCTCCGCCA
Downstream region at tRNA end position 
cttcttaaac
Secondary structure (Cloverleaf model)
>WENV170974822	Ser	TGA
                   c      GCCA cttcttaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T G
                    T     C T C C C     A
        A A        A      | + | | |     G
      T     T G C G       G G G G G     C
      G     | | | |                 T T
      G     A C G C
        T A        A     CGCCTTCGGGCTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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