The detailed information of tRNA gene sequence


Sequence ID>WENV170974827
Genome IDMTKY01076610
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1056
End posion on genome 1146
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaatttctgc
tRNA gene sequence 
GGAAGGGTGGCCGAGTGGCTTAAGGCGCACGCCTGGAAAGCGTGTTTGCGTTAATAGCGT
AACGGGGGTTCGAATCCCCCCCCTTCCGCCA
Downstream region at tRNA end position 
tcctgcgcca
Secondary structure (Cloverleaf model)
>WENV170974827	Ser	GGA
                   c      GCCA tcctgcgcca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TTTGCGTTAATAGCGTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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