The detailed information of tRNA gene sequence


Sequence ID>WENV170974845
Genome IDMTKY01077242
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 200
End posion on genome 110
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gagacctgct
tRNA gene sequence 
GGAGAGATGCCGGAGTGGTTGATCGGGGCGGTCTCGAAAACCGTTATGGGTCTTGTACCC
ATCGTGGGTTCGAACCCCACTCTCTCCGCCT
Downstream region at tRNA end position 
gaaaaatgcc
Secondary structure (Cloverleaf model)
>WENV170974845	Ser	CGA
                   t      GCCT gaaaaatgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          C A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      T G A        G     TATGGGTCTTGTACCCATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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