The detailed information of tRNA gene sequence


Sequence ID>WENV170974849
Genome IDMTKY01077486
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 787
End posion on genome 698
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cggacgcccc
tRNA gene sequence 
GGAGGGATGGCCGAGTGGACGATGGCGGCGGTCTTGAAAACCGTTGCGGCTGCGAAGTCG
CCGTGGGTTCGAATCCCACTCCCTCCGCCT
Downstream region at tRNA end position 
gaagaccctc
Secondary structure (Cloverleaf model)
>WENV170974849	Ser	TGA
                   c      GCCT gaagaccctc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G       + | | |                 T T
    A       T G G C
      C G A        G     TGCGGCTGCGAAGTCGCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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