The detailed information of tRNA gene sequence


Sequence ID>WENV170974861
Genome IDMTKY01078222
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 191
End posion on genome 282
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctccgcacta
tRNA gene sequence 
GGAGGCGTGCCAGAGCGGCCGAATGGGACTCACTGCTAATGAGTTGTCCGGCTAAAACCG
GACCGGAGGTTCAAATCCTCTCGCCTCCGCCA
Downstream region at tRNA end position 
cccgtacctt
Secondary structure (Cloverleaf model)
>WENV170974861	Ser	GCT
                   a      GCCA cccgtacctt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     A
    G       G A C C       G G A G G     C
    G         | | |                 T T
    C       A T G G
      C G A        G     TGTCCGGCTAAAACCGGACC
                    A - T
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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