The detailed information of tRNA gene sequence


Sequence ID>WENV170974875
Genome IDMTKY01079072
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1106
End posion on genome 1180
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cggcgcggct
tRNA gene sequence 
GCTCCCTTCGTCTATCGGTTAGGACGCGAGATTTTCATTCTTGAAAGAGGGGTTCGATTC
CCCTAGGGAGCGCCA
Downstream region at tRNA end position 
tttcagcatc
Secondary structure (Cloverleaf model)
>WENV170974875	Glu	TTC
                   t      GCCA tttcagcatc
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    G + T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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