The detailed information of tRNA gene sequence


Sequence ID>WENV170974913
Genome IDMTKY01080884
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 31201
End posion on genome 31104
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgcctctctc
tRNA gene sequence 
GGAAGTGCGCAGGTCACTGGTGGGCCTCCTGGACTTCAAATCCAGTGTGGGGGGCTGATA
CCCTCCCAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
attgatccga
Secondary structure (Cloverleaf model)
>WENV170974913	SeC(p)	TCA
                   c      GCCA attgatccga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    G     T A C C C     A
      C A C        C      + | | | |     G
    T       T G G A       G T G G G     C
    G       + | | |                 T T
    G       G C C T
      T G G        C     TGTGGGGGGCTGATACCCTCCCAG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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