The detailed information of tRNA gene sequence


Sequence ID>WENV170974923
Genome IDMTKY01081111
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1229
End posion on genome 1305
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgctggacga
tRNA gene sequence 
GGGGTCGTAGTTCAGCTGGTTAGAACGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCGGCCCCGCCA
Downstream region at tRNA end position 
tcgttcagcc
Secondary structure (Cloverleaf model)
>WENV170974923	Asp	GTC
                   a      GCCA tcgttcagcc
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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