The detailed information of tRNA gene sequence


Sequence ID>WENV170974930
Genome IDMTKY01081318
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5902
End posion on genome 5806
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tcagatgcgc
tRNA gene sequence 
GGAGCGGCGCTCGGTCTGGTGGCCGGCCCGGTCTTCAAAACCGGTGTTGGGCGGTAGCCC
CGTCCAGGGTGGGTTCGATTCCCATGCCGCTCCGCCA
Downstream region at tRNA end position 
gccaatttgc
Secondary structure (Cloverleaf model)
>WENV170974930	SeC(p)	TCA
                   c      GCCA gccaatttgc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G          T T
                    G     T A C C C     A
      T C T        C      + | | | |     G
    G       G G C T       G T G G G     C
    G       | | | +                 T T
    T       C C G G
      G G          C     TGTTGGGCGGTAGCCCCGTCCAGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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