The detailed information of tRNA gene sequence


Sequence ID>WENV170974945
Genome IDMTKY01081665
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1171
End posion on genome 1261
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccaagcatgc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCTCGCCTGGAAAGTGAGTATAGGTCAAAAGCCT
ATCGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
agttctaatc
Secondary structure (Cloverleaf model)
>WENV170974945	Ser	GGA
                   c      GCCA agttctaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATAGGTCAAAAGCCTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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