The detailed information of tRNA gene sequence


Sequence ID>WENV170974949
Genome IDMTKY01082396
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1647
End posion on genome 1571
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gttccagcgc
tRNA gene sequence 
GCGGTGGTAGCTCAGTTGGTTAGAGTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCCACCGCGCCA
Downstream region at tRNA end position 
gcttcttccc
Secondary structure (Cloverleaf model)
>WENV170974949	Asp	GTC
                   c      GCCA gcttcttccc
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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