The detailed information of tRNA gene sequence


Sequence ID>WENV170974955
Genome IDMTKY01082614
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1524
End posion on genome 1435
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cggaccagtT
tRNA gene sequence 
GGAGAGGTGCGAGAGCGGTCGAATCGGGCTCCCTGCTAAGGAGTTGTACCCCTAAAGGGT
ACCGGGGGTTCGAATCCCCCCCTCTCCGTat
Downstream region at tRNA end position 
gtgcccatag
Secondary structure (Cloverleaf model)
>WENV170974955	Ser	GCT
                   T      GTat gtgcccatag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G G G G G     C
    G         | | |                 T T
    T       A T C G
      C G A        G     TGTACCCCTAAAGGGTACC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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