The detailed information of tRNA gene sequence


Sequence ID>WENV170974958
Genome IDMTKY01082614
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1225
End posion on genome 1139
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttttgtccg
tRNA gene sequence 
GGAGAGATGTCCGAGAGGCCGAAGGAGCACGCTTGGAAAGCGTGTGTATCCGTGAGGGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGttt
Downstream region at tRNA end position 
ttccccttta
Secondary structure (Cloverleaf model)
>WENV170974958	Ser	GGA
                   g      Gttt ttccccttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TGTATCCGTGAGGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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