The detailed information of tRNA gene sequence


Sequence ID>WENV170974974
Genome IDMTKY01083260
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 418
End posion on genome 329
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acggacaggc
tRNA gene sequence 
GGAGTGGTGGCCGAGTGGTCGAAGGCACACCCCTGCTAAGGGTGCAGGCGGGGAACCGCC
TCGAGGGTTCGAATCCCTTCCACTCCGCCA
Downstream region at tRNA end position 
catattgttg
Secondary structure (Cloverleaf model)
>WENV170974974	Ser	GCT
                   c      GCCA catattgttg
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CAGGCGGGGAACCGCCTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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