The detailed information of tRNA gene sequence


Sequence ID>WENV170974985
Genome IDMTKY01084342
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1003
End posion on genome 1088
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttgctcacgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCTATGGCGGCGGTCTTGAAAACCGCTGAGCGCAAGCTCCGG
GGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tcttttatag
Secondary structure (Cloverleaf model)
>WENV170974985	Ser	TGA
                   c      GCCA tcttttatag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G       + | | |                 T T
    T       T G G C
      C T A        G     TGAGCGCAAGCTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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