The detailed information of tRNA gene sequence


Sequence ID>WENV170975002
Genome IDMTKY01085036
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 973
End posion on genome 1049
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tgaccgtatt
tRNA gene sequence 
CGGAGTGTAGCTCAGCCTGGTAGAGCACTGCCTTCGGGAGGCAGGGGTCGAAGGTTCGAA
TCCTTTCACTCCGACCA
Downstream region at tRNA end position 
attcgcnnnn
Secondary structure (Cloverleaf model)
>WENV170975002	Pro	CGG
                   t      ACCA attcgcnnnn
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T T T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G A A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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