The detailed information of tRNA gene sequence


Sequence ID>WENV170975006
Genome IDMTKY01085218
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 299
End posion on genome 375
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gccaaattgt
tRNA gene sequence 
CGGAGTGTAGCGCAGTCTGGTAGCGCACCTGCTTCGGGAGCAGGGGGTCGGAGGTTCGAA
TCCTCTCACTCCGACCA
Downstream region at tRNA end position 
atttttgaat
Secondary structure (Cloverleaf model)
>WENV170975006	Pro	CGG
                   t      ACCA atttttgaat
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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