The detailed information of tRNA gene sequence


Sequence ID>WENV170975020
Genome IDMTKY01085965
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3417
End posion on genome 3341
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
agagcacccc
tRNA gene sequence 
GGGGACGTAGCTCAGCTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCGTGGGTTCGAG
TCCCATCGTCTCCACCG
Downstream region at tRNA end position 
agtggtcgcc
Secondary structure (Cloverleaf model)
>WENV170975020	Ala	TGC
                   c      ACCG agtggtcgcc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     T A C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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