The detailed information of tRNA gene sequence


Sequence ID>WENV170975023
Genome IDMTKY01086182
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 222
End posion on genome 296
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttgaacgact
tRNA gene sequence 
GGCCCCTTCGTCTAACGGCTAGGACACCGCTCTTTCAAGGCGGCGGCAGGGGTTCGATTC
CCCTAGGGGCTACCA
Downstream region at tRNA end position 
aatatgtcgg
Secondary structure (Cloverleaf model)
>WENV170975023	Glu	TTC
                   t      ACCA aatatgtcgg
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C A A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      T A          A     CGGC
                    C - G
                    C - G
                    G - C
                    C - G
                    T + G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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