The detailed information of tRNA gene sequence


Sequence ID>WENV170975032
Genome IDMTKY01086717
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 220
End posion on genome 145
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ggcgccgggt
tRNA gene sequence 
GCCTCGGTAGCTCAATTGGTAGAGCAGTTGACTCTTAATCAATTGGTTCTAGGTTCGAGT
CCTAGCCGGGGTACCA
Downstream region at tRNA end position 
acctcctccc
Secondary structure (Cloverleaf model)
>WENV170975032	Lys	CTT
                   t      ACCA acctcctccc
                     G + T
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T G
                    T     G A T C C     A
      T A A        A      | | | | |     G
    T       C T C G       C T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTT
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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