The detailed information of tRNA gene sequence


Sequence ID>WENV170975033
Genome IDMTKY01086722
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 898
End posion on genome 988
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctagccgttc
tRNA gene sequence 
GGAGGGGTGCCGGAGCGGCCGATCGGGGCGGTCTCGAAAACCGTTGTGGGCCTTGTGCCC
ACCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
caggagcgga
Secondary structure (Cloverleaf model)
>WENV170975033	Ser	CGA
                   c      GCCA caggagcgga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    C       T C G G
      C G A        G     TGTGGGCCTTGTGCCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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