The detailed information of tRNA gene sequence


Sequence ID>WENV170975046
Genome IDMTKY01088660
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 232
End posion on genome 308
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgcccgttgc
tRNA gene sequence 
AGGGGCGTAGCTCAATTTGGTAGAGCAACGGTCTCCAAAACCGTAGGTTGTCGGTTCGAG
TCCGGCCGCCCCTGCCA
Downstream region at tRNA end position 
ttgcgaaagc
Secondary structure (Cloverleaf model)
>WENV170975046	Trp	CCA
                   c      GCCA ttgcgaaagc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C G G C C     A
      T A A        A      | + | | |     G
    T       C T C G       G T C G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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