The detailed information of tRNA gene sequence


Sequence ID>WENV170975053
Genome IDMTKY01089144
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2240
End posion on genome 2165
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taattgttcT
tRNA gene sequence 
AGGGGGTTAGCTCAATTGGCAGAGCGACGGTCTCCAAAACCGTAGGCTGCGGGTTCGATT
CCTGCACCCCCTGTCg
Downstream region at tRNA end position 
aggccggccc
Secondary structure (Cloverleaf model)
>WENV170975053	Trp	CCA
                   T      GTCg aggccggccc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGCT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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