The detailed information of tRNA gene sequence


Sequence ID>WENV170975060
Genome IDMTKY01089552
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 879
End posion on genome 792
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tactgattca
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGTTGATCGGGGCGCTCTCGAAAAGCGTTGTGGCTGTGAGGTCA
CCGTGGGTTCGAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
aatgaacccc
Secondary structure (Cloverleaf model)
>WENV170975060	Ser	CGA
                   a      GCtg aatgaacccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      T G A        G     TGTGGCTGTGAGGTCACC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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