The detailed information of tRNA gene sequence


Sequence ID>WENV170975061
Genome IDMTKY01089644
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 102
End posion on genome 13
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cccaaagcgc
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTCGATCGGGGCGGTCTCGAAAACCGTTGTGGGTTTGCGCCCA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
cttgccctca
Secondary structure (Cloverleaf model)
>WENV170975061	Ser	CGA
                   c      GCCA cttgccctca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      C G A        G     TGTGGGTTTGCGCCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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