The detailed information of tRNA gene sequence


Sequence ID>WENV170975070
Genome IDMTKY01090029
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1040
End posion on genome 1116
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ccacgttctt
tRNA gene sequence 
CGGGGCGTGGCGCAGACTGGTAGCGCGCTTGAATGGGGTTCAAGAGGTCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
aaacgggtcg
Secondary structure (Cloverleaf model)
>WENV170975070	Pro	GGG
                   t      ACCA aaacgggtcg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      A G A        G      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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