The detailed information of tRNA gene sequence


Sequence ID>WENV170975078
Genome IDMTKY01090385
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1036
End posion on genome 947
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctgaagcgc
tRNA gene sequence 
GGAGAGGTGACGGAGTGGTCGATCGTGGCGGTCTCGAAAACCGTTGTAGGTTTGCGCCTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttcacttccc
Secondary structure (Cloverleaf model)
>WENV170975078	Ser	CGA
                   c      GCCA ttcacttccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C A       G T G G G     C
    G       + | | |                 T T
    T       T C G T
      C G A        G     TGTAGGTTTGCGCCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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