The detailed information of tRNA gene sequence


Sequence ID>WENV170975079
Genome IDMTKY01090460
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1156
End posion on genome 1080
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cactccctgt
tRNA gene sequence 
GGGCGTATAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGCCGGTCGCAGGTTCGAG
TCCTGCTGCGCCCACCA
Downstream region at tRNA end position 
cattgtcgtt
Secondary structure (Cloverleaf model)
>WENV170975079	Met	CAT
                   t      ACCA cattgtcgtt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T + G
                     A - T          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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