The detailed information of tRNA gene sequence


Sequence ID>WENV170975087
Genome IDMTKY01090944
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 307
End posion on genome 383
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaagttttga
tRNA gene sequence 
TGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAA
TCCGGCCCCCGCTACCA
Downstream region at tRNA end position 
atcgatcact
Secondary structure (Cloverleaf model)
>WENV170975087	Met	CAT
                   a      ACCA atcgatcact
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
      C G A        G      | + | | |     A
    C       C G A G       G T C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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