The detailed information of tRNA gene sequence


Sequence ID>WENV170975088
Genome IDMTKY01091048
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 215
End posion on genome 291
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcgcttcga
tRNA gene sequence 
CGCGGGATGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTCAGTTCAAA
TCTGGCTCCCGCAACCA
Downstream region at tRNA end position 
aaaaaggcct
Secondary structure (Cloverleaf model)
>WENV170975088	Met	CAT
                   a      ACCA aaaaaggcct
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G G T C     A
      C G A        G      | + | | |     A
    C       C G A G       G T C A G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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