The detailed information of tRNA gene sequence


Sequence ID>WENV170975112
Genome IDMTKY01092110
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 404
End posion on genome 478
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttgtcacttc
tRNA gene sequence 
GGGCGCGTAGCTCAGTTGGTTAGAGCGCACGGTTCACATCCGTGAGGTTCGGAGGTTCGA
GCCCTCTCGCGCCCAtgt
Downstream region at tRNA end position 
aatctgcttt
Secondary structure (Cloverleaf model)
>WENV170975112	Val	CAC
                   c      Atgt aatctgcttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C G
                    T     T C T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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