The detailed information of tRNA gene sequence


Sequence ID>WENV170975135
Genome IDMTKY01093543
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4060
End posion on genome 3976
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ctggtgccgt
tRNA gene sequence 
GCCGGAGTGGCGGAATGGCAGACGCAACGGTCTTAAACACCGTAGGGCTATGCCCGTGCG
GGTTCGAGTCCCGCCTCCGGTACCT
Downstream region at tRNA end position 
acaggattgt
Secondary structure (Cloverleaf model)
>WENV170975135	Leu	TAA
                   t      ACCT acaggattgt
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    G       G G C G       G C G G G     C
    G         | | |                 T T
    C       A C G C
      A G          A     AGGGCTATGCCCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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