The detailed information of tRNA gene sequence


Sequence ID>WENV170975142
Genome IDMTKY01093767
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 90
End posion on genome 165
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
agggcgccgg
tRNA gene sequence 
GGGGCTATAGCGCAGTTGGTAGCGCGTCTCGTTCGCATCGAGAAGGTCAGGGGTTCGATT
CCCCTTAGCTCCACCA
Downstream region at tRNA end position 
cagcacgagg
Secondary structure (Cloverleaf model)
>WENV170975142	Ala	CGC
                   g      ACCA cagcacgagg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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