The detailed information of tRNA gene sequence


Sequence ID>WENV170975143
Genome IDMTKY01093823
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 311
End posion on genome 222
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgaggcgttc
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTTGAATGGGGCGGTCTCGAAAACCGTTGTAGTCTTCGGGCTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCT
Downstream region at tRNA end position 
tgtaagaaac
Secondary structure (Cloverleaf model)
>WENV170975143	Ser	CGA
                   c      GCCT tgtaagaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TGTAGTCTTCGGGCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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