The detailed information of tRNA gene sequence


Sequence ID>WENV170975148
Genome IDMTKY01094074
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 226
End posion on genome 155
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gcccgttccc
tRNA gene sequence 
GGGCGCGTAGCTCAGCGGGAGAGCGCTCGCTTCACACGCGAGAGGTCGCTGGTTCGAAAC
CAGCCGTGCCCAtat
Downstream region at tRNA end position 
tgttcggact
Secondary structure (Cloverleaf model)
>WENV170975148	Val	CAC
                   c      Atat tgttcggact
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     G - C          A A
                    T     C G A C C     A
        G A        A      | | | | |     G
      C     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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