The detailed information of tRNA gene sequence


Sequence ID>WENV170975158
Genome IDMTKY01094753
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 732
End posion on genome 645
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttcggggct
tRNA gene sequence 
GGCGAGGTCGCATAGTGGTCTAGTGCAGCCGCCTTGAAAGCGGCCGAGCGTAAAAGCTCC
GTGGGTTCGAATCCCACCCTCGCCGCCA
Downstream region at tRNA end position 
ccgcggccac
Secondary structure (Cloverleaf model)
>WENV170975158	Ser	TGA
                   t      GCCA ccgcggccac
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        A     CGAGCGTAAAAGCTCC
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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