The detailed information of tRNA gene sequence


Sequence ID>WENV170975186
Genome IDMTKY01095776
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1950
End posion on genome 2047
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gaggctgctc
tRNA gene sequence 
GGGGGTGGTTGAGTCCCGGTGGGCTCCGCGGTCTTCAAAACCGTCTGTGGCGGCGTTCAA
GCGTCGCTAGGTGGGTTCGACTCCCATCCACTCCCGCCt
Downstream region at tRNA end position 
tgatgtgggc
Secondary structure (Cloverleaf model)
>WENV170975186	SeC(p)	TCA
                   c      GCCt tgatgtgggc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | |                 T T
    T       G C T C
      G G          C     CTGTGGCGGCGTTCAAGCGTCGCTAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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