The detailed information of tRNA gene sequence


Sequence ID>WENV170975189
Genome IDMTKY01095913
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 485
End posion on genome 396
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cacccggccC
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTTCCCTGCTAAGGAAGTATGCGGCAACCCCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGTtt
Downstream region at tRNA end position 
tcagcctgcg
Secondary structure (Cloverleaf model)
>WENV170975189	Ser	GCT
                   C      GTtt tcagcctgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGCGGCAACCCCGTATC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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