The detailed information of tRNA gene sequence


Sequence ID>WENV170975195
Genome IDMTKY01096530
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1948
End posion on genome 2021
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtcacagcct
tRNA gene sequence 
GGTCCCGTGGTGAAGTGGAGTTCACGCCGGCCTGTCAAGCCGGAGGTCGCGGGTTCGAAC
CCCGTCGGGACCGCtc
Downstream region at tRNA end position 
gggcgcaagc
Secondary structure (Cloverleaf model)
>WENV170975195	Asp	GTC
                   t      GCtc gggcgcaagc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          C A
                    T     T G C C C     A
      T G A        G      + | | | |     G
    G       A G T G       G C G G G     C
    G       | | | |                 T T
    A       T C A C
      G T          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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