The detailed information of tRNA gene sequence


Sequence ID>WENV170975199
Genome IDMTKY01096638
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 218
End posion on genome 143
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tggatggtat
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGGAGAGCGCCACAATGGCATTGTGGAGGTCAAGGGTTCGAAC
CCCTTCAGGTCCACCT
Downstream region at tRNA end position 
ttgtaccgtc
Secondary structure (Cloverleaf model)
>WENV170975199	Ala	GGC
                   t      ACCT ttgtaccgtc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          C A
                    T     T T C C C     A
      T A A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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