The detailed information of tRNA gene sequence


Sequence ID>WENV170975200
Genome IDMTKY01096701
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 471
End posion on genome 562
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcgcacgtct
tRNA gene sequence 
GGAGAGGTGCCCGAGTCAGGTCGAAGGGACCGCACTGCTAATGCGGGGACCGCCTCACGG
CGGTCCGTGGGTTCAAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
aaaccaacgg
Secondary structure (Cloverleaf model)
>WENV170975200	Ser	GCT
                   t      GCtg aaaccaacgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     A
  A         G C C C       G T G G G     C
  G           | | |                 T T
  G         A G G G
    T C G A        A     GGACCGCCTCACGGCGGTCC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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