The detailed information of tRNA gene sequence


Sequence ID>WENV170975240
Genome IDMTKY01098738
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 266
End posion on genome 180
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tcataccggg
tRNA gene sequence 
GCACCCGTGGTGAAATTGGCAGACACGTAAGATTCAGGTTCTTATGCCCTTAAAAGCGTG
TGGGTTCGAGTCCCTCCGGGTGCACCA
Downstream region at tRNA end position 
ctttttttgt
Secondary structure (Cloverleaf model)
>WENV170975240	Leu	CAG
                   g      ACCA ctttttttgt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        G      |   | | |     G
    T       A G T G       G T G G G     C
    G         | | |                 T T
    G       A C A C
      C A G        G     TGCCCTTAAAAGCGT
                    T - A
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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