The detailed information of tRNA gene sequence


Sequence ID>WENV170975254
Genome IDMTKY01099521
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 331
End posion on genome 428
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgggccatac
tRNA gene sequence 
GGAGCGGCTCGTGGTCCGGTGACCACCGCGGTCTTCAAAACCGTCTGCGGGGCGGTGATC
CCGTCCTGGGTGGGTTCGACTCCCATGTCGCTCCGCCA
Downstream region at tRNA end position 
ctgcgttctg
Secondary structure (Cloverleaf model)
>WENV170975254	SeC(p)	TCA
                   c      GCCA ctgcgttctg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G          T C
                    T     T A C C C     A
      C C T        C      + | | | |     G
    G       G G T G       G T G G G     C
    G       | | | |                 T T
    T       C C A C
      G A          C     CTGCGGGGCGGTGATCCCGTCCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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